Qiao Jin


Tsinghua Univeristy · Beijing, China 100084 · (+86)188-1096-5683 · qiaojin.andy@gmail.com

I am a seventh year M.D. candidate at School of Medicine, Tsinghua University, currently doing my internship at Peking Union Medical College Hospital, the best hopital in China. I work with Dr. Sheng Yu at Tsinghua University and my research interests lie at the intersections of natural language processing, deep learning and biomedicine.

Prior to this, I spent two wonderful years at Department of Biomedical Informatics, University of Pittsburgh as a visiting research scholar. I worked with Dr. Xinghua Lu from UPitt, Dr. William Cohen and Bhuwan Dhingra from CMU. During my undergraduate studies, I worked with Dr. Xuegong Zhang on bioinformatics at Tsinghua University.

I am interested in building real intelligent systems that can read and understand biomedical texts. Such systems will empower human doctors and patients with the unreasonable effectiveness of data. My long-term goal is to contribute to democratizing medicine and revolutioning medical education in the AI era.

Last modified: Oct, 2020


Tsinghua University

Bachelor of Science, Doctor of Medicine
Clinical Medicine

Overall GPA 93.27/100, Rank 1/32

August 2014 - Present

Papers & Patents

  1. Surging Publications on the COVID-19 Pandemic [paper]
    Guanqiao Li, Yangzhong Zhou, Junyi Ji, Xiaozhen Liu, Qiao Jin, Linqi Zhang
    Clinical Microbiology and Infection, 2020
  2. Predicting Clinical Trial Results Using Implicit Evidence Integration [arXiv] [code]
    Qiao Jin, Chuanqi Tan, Mosha Chen, Xiaozhong Liu, Songfang Huang
    EMNLP, 2020
  3. Tackling MeSH Indexing Dataset Shift with Time-aware Concept Embedding Learning [paper]
    Qiao Jin, Haoyang Ding, linfeng Li, Haitao Huang, Lei Wang, Jun Yan
    DASFAA, 2020
  4. PubMedQA: A Dataset for Biomedical Research Question Answering [arXiv] [pdf] [code] [homepage]
    Qiao Jin, Bhuwan Dhingra, Zhengping Liu, William W. Cohen and Xinghua Lu
    EMNLP, 2019
  5. Deep Contextualized Biomedical Abbreviation Expansion [arXiv] [pdf]
    Qiao Jin, Jinling Liu and Xinghua Lu
    ACL BioNLP, 2019
  6. Probing Biomedical Embeddings from Language Models [arXiv] [pdf] [code]
    Qiao Jin, Bhuwan Dhingra, William W. Cohen and Xinghua Lu
    NAACL RepEval, 2019
  7. Automatic Human-like Mining and Constructing Reliable Genetic Association Database with Deep Reinforcement Learning [bioRxiv] [pdf]
    Haohan Wang, Xiang Liu, Yifeng Tao, Wenting Ye, Qiao Jin, William W. Cohen and Eric P. Xing
    PSB, 2019
  8. AttentionMeSH: Simple, Effective and Interpretable Automatic MeSH Indexer [pdf] [code] [slides]
    Qiao Jin, Bhuwan Dhingra, William W. Cohen and Xinghua Lu
    EMNLP BioASQ, 2018
  9. Neural Models for Reasoning over Multiple Mentions using Coreference [arXiv] [pdf] [code]
    Bhuwan Dhingra, Qiao Jin, Zhilin Yang, William W. Cohen and Ruslan Salakhutdinov
    NAACL, 2018
  10. Visual Servo Control Method of Multi-Task Surgical Robot [Application]
    Shijie Zhu, Yu Chen, Bicong Zhang, Yitong Chen, Qiao Jin, Jiawei Sun, Boyuan Deng, Liyuan Jiang, Gangtie Zheng, Yongwei Pan, Zhe Zhao, Jiuzheng Deng
    Patent filed in China, 2017

Awards & Honors


  • 2015 - National Scholarship - Ministry of Education of China
  • 2015, 2016, 2018, 2019 - Scholarship for Academic Excellence - Tsinghua University
  • 2016 - Tsinghua & Wuliangye Technology Jiujiu Scholarship
  • 2016 - Scholarship for Science and Technology Innovation - Tsinghua University
  • 2016, 2017 - Scholarship for Comprehensive Excellence - Tsinghua University
  • 2016, 2017 - Xuetang Scholarship - Tsinghua University
  • 2017, 2018, 2019 - Tsinghua & Dalian Yejian Scholarship

Research and Competition Awards

  • 2013 - Chinese Chemistry Olympiad (CChO) Gold Medal - Chinese Chemical Society (CCS)
  • 2015 - International Genetically Engineered Machine (iGEM) Competition Gold Medal - iGEM Foundation
  • 2017 - Second Prize SRT Project (Based on a sequenced pedigree: a novel TTN truncating variant related to dilated cardiomyopathy) - Tsinghua University
  • 2017 - Second Prize SRT Project (Building of an orthopedics surgical robot with visual servo system) - Tsinghua University
  • 2018 - First place at BioBank Disease Challenge ($12,500) - Partners Healthcare

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