Qiao Jin

靳琪奥

Tsinghua Univeristy · Beijing, China 100084 · (+86)188-1096-5683 · qiaojin.andy@gmail.com

I am a seventh year M.D. candidate at School of Medicine, Tsinghua University, currently doing my internship at Peking Union Medical College Hospital, the best hopital in China. I work with Dr. Sheng Yu at Tsinghua University and my research interests lie at the intersections of natural language processing, deep learning and biomedicine.

Prior to this, I spent two wonderful years at Department of Biomedical Informatics, University of Pittsburgh as a visiting research scholar. I worked with Dr. Xinghua Lu from UPitt, Dr. William Cohen and Bhuwan Dhingra from CMU. During my undergraduate studies, I worked with Dr. Xuegong Zhang on bioinformatics at Tsinghua University.

I am interested in building real intelligent systems that can read and understand biomedical texts. Such systems will empower human doctors and patients with the unreasonable effectiveness of data. My long-term goal is to contribute to democratizing medicine and revolutioning medical education in the AI era.

Last modified: Jan, 2020

Education

Tsinghua University

Bachelor of Science, Doctor of Medicine
Clinical Medicine

Overall GPA 93.27/100, Rank 1/32

August 2014 - Present

Papers & Patents

  1. Surging Publications on the COVID-19 Pandemic
    Guanqiao Li, Yangzhong Zhou, Junyi Ji, Xiaozhen Liu, Qiao Jin, Linqi Zhang
    Clinical Microbiology and Infection, 2020
  2. Predicting Clinical Trial Results Using Implicit Evidence Integration
    Qiao Jin, Chuanqi Tan, Mosha Chen, Xiaozhong Liu, Songfang Huang
    EMNLP, 2020
  3. Tackling MeSH Indexing Dataset Shift with Time-aware Concept Embedding Learning
    Qiao Jin, Haoyang Ding, linfeng Li, Haitao Huang, Lei Wang, Jun Yan
    DASFAA, 2020
  4. PubMedQA: A Dataset for Biomedical Research Question Answering [arXiv] [pdf] [code] [homepage]
    Qiao Jin, Bhuwan Dhingra, Zhengping Liu, William W. Cohen and Xinghua Lu
    EMNLP, 2019
  5. Deep Contextualized Biomedical Abbreviation Expansion [arXiv] [pdf]
    Qiao Jin, Jinling Liu and Xinghua Lu
    ACL BioNLP, 2019
  6. Probing Biomedical Embeddings from Language Models [arXiv] [pdf] [code]
    Qiao Jin, Bhuwan Dhingra, William W. Cohen and Xinghua Lu
    NAACL RepEval, 2019
  7. Automatic Human-like Mining and Constructing Reliable Genetic Association Database with Deep Reinforcement Learning [bioRxiv] [pdf]
    Haohan Wang, Xiang Liu, Yifeng Tao, Wenting Ye, Qiao Jin, William W. Cohen and Eric P. Xing
    PSB, 2019
  8. AttentionMeSH: Simple, Effective and Interpretable Automatic MeSH Indexer [pdf] [code] [slides]
    Qiao Jin, Bhuwan Dhingra, William W. Cohen and Xinghua Lu
    EMNLP BioASQ, 2018
  9. Neural Models for Reasoning over Multiple Mentions using Coreference [arXiv] [pdf] [code]
    Bhuwan Dhingra, Qiao Jin, Zhilin Yang, William W. Cohen and Ruslan Salakhutdinov
    NAACL, 2018
  10. Visual Servo Control Method of Multi-Task Surgical Robot [Application]
    Shijie Zhu, Yu Chen, Bicong Zhang, Yitong Chen, Qiao Jin, Jiawei Sun, Boyuan Deng, Liyuan Jiang, Gangtie Zheng, Yongwei Pan, Zhe Zhao, Jiuzheng Deng
    Patent filed in China, 2017

Awards & Honors

Scholarships

  • 2015 - National Scholarship - Ministry of Education of China
  • 2015, 2016, 2018, 2019 - Scholarship for Academic Excellence - Tsinghua University
  • 2016 - Tsinghua & Wuliangye Technology Jiujiu Scholarship
  • 2016 - Scholarship for Science and Technology Innovation - Tsinghua University
  • 2016, 2017 - Scholarship for Comprehensive Excellence - Tsinghua University
  • 2016, 2017 - Xuetang Scholarship - Tsinghua University
  • 2017, 2018, 2019 - Tsinghua & Dalian Yejian Scholarship

Research and Competition Awards

  • 2013 - Chinese Chemistry Olympiad (CChO) Gold Medal - Chinese Chemical Society (CCS)
  • 2015 - International Genetically Engineered Machine (iGEM) Competition Gold Medal - iGEM Foundation
  • 2017 - Second Prize SRT Project (Based on a sequenced pedigree: a novel TTN truncating variant related to dilated cardiomyopathy) - Tsinghua University
  • 2017 - Second Prize SRT Project (Building of an orthopedics surgical robot with visual servo system) - Tsinghua University
  • 2018 - First place at BioBank Disease Challenge ($12,500) - Partners Healthcare

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